Iycee Charles de Gaulle Summary Fatty Liver Disease The Effect Of Echo Spacing Biology Essay

Fatty Liver Disease The Effect Of Echo Spacing Biology Essay

An optimized fat-water multi-parametric imagination which combines conventional sequences with some of the advanced MRI techniques could enable a comprehensive scrutiny of the liver, supplying information on the presence of fat, Fe, and fibrosis every bit good as hepatocellular carcinoma ( HCC ) and portal high blood pressure and could stand for the hereafter of abdominal imagination, could perchance replace liver biopsy, or at least be a mechanism for supervising curative patterned advance of chronic liver disease.

The migration to clinical 3T MR imagination can supply higher signal/noise ratio ratios and should in theory improve image quality. T2-contrast images have their maximum signal strength in fluid-filled parts, which is of import in contrasting tissues in clinical applications. Fatty liver disease is the most common cause of chronic liver disease in both kids and grownups ; but fat is said to bring forth high signal strength on everyday individual short fast spin-echo ( SSFSE ) sequences which may befog pathological causes of the high signal emanating from constructions that are surrounded by fat, include variety meats such as intestine, pancreas, and kidneys. It has been shown that many of these pathological conditions show up most readily under T2-contrast images, and as such T2-weighted images are used in concurrence with proton-density-weighted or T1-weighted images as anatomical mentions in many advanced MRI surveies. T2-weighting follows straight from the spin denseness burdening sequence and the signal is normally the 2nd reverberation which is produced by a 2nd 180-degree pulsation in a given TR spin reverberation pulse sequence. The influence of T2 is minimized in a short TE and as such T2-contrasted images can non be obtained at short reverberation clip ( TE ) , but at intermediate echo times at which the differences in magnetisation between tissues can be maximized.

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T2-weighted images can be generated utilizing spin-echo based pulsation sequences which allow true spin-spin relaxation independent of the field inhomogeneity. Optimal echo spacing is manner to supply better signal/noise ratio ratio ( SNR ) in shorter scan clip. Echo infinite is the distance in clip between the reverberations in multiple echo sequences and shorter echo infinite produces compact sequence timing, more pieces and better declaration and perchance reduced artefacts.

Given hardware fabricating restrictions in multi-echo imagination measurings and that the clip required for trying each reverberation is typically on the order of msecs ; there is frequently a lower bound on the first reverberation and as such the spacing for the 2nd and subsequent reverberations.

Inversion Recovery ( IR ) :

While inversion-recovery ( IR ) techniques have favourable features in supplying more robust uniformity and are by and large less sensitive to susceptibleness affects ; a possible drawback to its most common execution is the usage of broad frequence bandwidth which may include both fat and H2O spins, and which has resulted in H2O signal non being to the full recovered during informations acquisition, and overall H2O signal/noise ratio ratio ( SNR ) being diminished. The image formed from the first TE is normally proton denseness weighted, and as TE is increased, more T2 contrast is achieved, but at the disbursal of decreased cross magnetisation signal.

Echo spacing has undetermined impact on the direct standardization of T2 relaxation values. The aim is to look into the consequence of echo spacing on the quantification of T2 relaxation values utilizing 3.0 Tesla machine as a precursor for farther probe of its application in abdominal imagination for direct fat quantification in fatty liver diseases.


There are many causes of advanced liver failure or chronic liver disease including nonalcoholic fatty liver disease ( NAFLD ) , inordinate usage of intoxicant, viral infections, primary sclerosing cholangitis, primary iron-storage disease, and autoimmune disease. Chronic liver diseases can take to hepatic fibrosis, cirrhosis, end-stage liver disease, portal high blood pressure, hepatocellular carcinoma ( HCC ) and these can be the primary cause of many morbidity, mortality, every bit good every bit representing as major drain on national wellness attention resources. In the United States, two primary causes of chronic liver disease are hepatitis C virus ( HCV ) infection and nonalcoholic fatso liver disease ( NAFLD ) .It is estimated that hepatitis C virus ( HCV ) infections account for approximately 40 % of all the chronic liver diseases, and is the most frequent cause for liver organ transplant, every bit good as doing an estimated 10,000 deceases per twelvemonth [ 1,2 ] . The incidence of nonalcoholic fatty liver disease ( NAFLD ) is increasing with the turning world-wide epidemic of fleshiness. In United States the prevalence of nonalcoholic fatty liver disease has increased dramatically, which reflects the fleshiness epidemic that afflicts an estimated 100 million people including 10 % of kids.

With these increasing epidemics of fleshiness and diabetes, nonalcoholic fatty liver disease may catch chronic HCV infection as the taking cause of chronic liver failure within the following decennary. Nonalcoholic fatty liver disease ( NAFLD ) encompasses a spectrum of conditions associated with lipid deposition in hepatocytes, and ranges from steatosis ( simple fatty liver ) , to nonalcoholic steatohepatitis ( NASH ) , and to progress fibrosis and cirrhosis. Simple fatty liver is believed to be a benign status, but NASH can come on to fibrosis and may take to end-stage liver disease. Patients with nonalcoholic steatohepatitis have higher degrees of aspartate transaminase and ferritin, more hepatocyte ballooning, and more fibrosis in histologic subdivisions [ 27-29 ] . The pathogenesis of HCV, NAFLD and NASH varies in many ways, but may finally take to accretion of both fats and chainss in the hepatocytes.

The accretion of these elements in the liver, in add-on to redness, may take to irreversible harm to liver cells ; therefore lending to fatty liver disease being the most common cause of chronic liver disease in the United States.Designation and quantification of chronic liver diseases have been extensively studied, utilizing blood trials as marker for liver map, liver biopsies and most of the non-invasive diagnostic imagination, including Ultra sound, computed imaging ( CT ) , conventional and advanced MRI. Hepatic fibrogenesis is a complex dynamic procedure, which is mediated by necroinflammation and activation of stellate cells with unnatural collagen deposition [ 4 ] . Liver map trial has non shown to correlate good with the grade of fibrosis. Serologic markers of hepatic fibrosis, such as aspartate transaminase ( AST ) /ALT ratio, thrombocyte count, and prothrombin index, are said to hold variable truths [ 3 ] . Another old survey showed that up to 40 % of patients with advanced fibrosis have persistently normal alanine transaminase ( ALT ) degrees [ 5 ] .Liver biopsy is said to be the gilded criterion in the diagnosing of chronic liver diseases. Liver biopsy is utile in finding the presence of steatosis, steatohepatitis, measuring the grade of fibrosis and can besides be helpful in governing out other alternate diagnosing.

Although liver biopsy is a comparatively safe process when performed by experient clinicians ; it has hapless patient credence, is non risk free, and the consequences are inherently subjective. The restriction of liver biopsies include the heterogeneousness of disease distribution throughout the liver parenchyma, which result in significant trying variableness, diagnostic and presenting inaccuracies related to the random sampling of limited parts of the full volume of the liver [ 9, 10 ] . A dependable and consistent noninvasive marker of hepatic fibrosis is strongly needed, a tool that would cut down biopsy-related hazards and costs, and which could be utile for steering antiviral intervention and monitoring intervention efficaciousness, and can be used for clinical rating of new types of antiviral and antifibrotic drugs [ 3 ] .A liver ultrasound scrutiny is utile for corroborating steatosis, it has non been successful in governing out steatohepatitis or fibrosis, and its sensitiveness beads aggressively when the grade of steatosis lessenings below 30 % . Due to better CT image quality since the debut of multi-detector, CT use has well increased for the showing of liver diseases [ 18 ] . Unenhanced CT is considered the best CT method for appraisal of liver fat ; and it involves simple measuring of liver fading in Hounsfield units [ 19-22 ] . The measuring of fading is based on the physical feature of x-ray incursion of tissue. But with ionizing radiation, CT can non be used on a drawn-out footing to supervise disease forecast and the response to therapy.

Conventional MRI is biologically based may really be more sensitive than CT, and without the effects of ionising radiations, has become an progressively of import imagination technique for the probe of patients with chronic liver disease. Recent progresss in MRI have led to a turning involvement in optimising the MRI methods for appraisal of chronic liver diseases. These MRI methods include but are non limited to versions of T1-weighted, T2-weighted, PD-weighted, diffusion-weighted imagination ( DWI ) , perfusion-weighted MRI, MR elastography ( MRE ) , and MR spectrometry ( MRS ) .

However, many of the MRI sequences involve complex acquisition and processing, some wanting learning curve and in some instances the sequence may be unavailable for clinical usage. Even though that most of MRI findings are besides be subjective, and capable to interobserver variableness and with changing grades in sensitiveness and specificity ; it provides ample chance for huge betterment and broad acceptableness.


The acknowledgment of nonalcoholic steatohepatitis as a distinguishable diagnosing has increased involvement in noninvasive quantification of both liver fat and Fe sedimentation with MRI imagination, since such measurings might function as markers of the disease badness and curative response. Many of the diagnosings and quantifications of hepatic steatosis with MRI sequences exploit the fact that fat resonates more easy than H2O ( 210 Hz at 1.5 T ) . Among many MRI sequences, MRS is considered to be the mention criterion method for mensurating hepatic fat content, with many surveies demoing strong correlativities between MRS and known classs of steatosis.

MRS uses single-voxel spectrometry attacks which interrogates a big voxel ( typically 2.0 ten 2.0 ten 2.0 centimeter, or 8.0 cm3 ) , but this can non supply accurate volumetric rating of the fat content of the liver. It is good known that hepatic steatosis is frequently heterogenous, and a single-voxel spectrometry can non supply a comprehensive rating of hepatic steatosis. Other surveies have suggested that in-phase and out-of-phase imagination can be used to quickly gauge the liver fat content in patients with nonalcoholic fatty liver disease ( NAFLD ) .

It has besides been shown that cirrhosis is associated with increased liver Fe sedimentation [ 23 ] , which being a paramagnetic substance consequences in localised field inhomogeneity. Any such field inhomogeneity may do T2* effects and self-contradictory signal strength loss on in-phase versus out-of-phase MR images because of the longer echo clip of the in-phase images [ 3 ] . Other MRI methods that have been developed for the quantification of hepatic Fe overload are based on both T2*- and T2-weighted imagination that was ab initio developed by Gandon et al ; it uses a combination of 2D gradient-echo images acquired with proton denseness ( PD ) weighting, T1 weighting, and intensifying T2* weighting. Wood, et Al.

besides has similar attacks of Fe quantification that focused on direct measuring of T2* or R2* mapping utilizing a 3D multi-echo gradient-echo acquisition [ 25 ] . It has besides been shown that fat demonstrates high signal strength on T2-weighted fast spin-echo and single-shot fast spin-echo ( SSFSE ) MR images. The consequence being that fat quantification, by both fast spin-echo and single-shot fast spin-echo sequences could be more sensitive for sensing of the presence of fat than are conventional spin-echo T2-weighted sequences [ 26 ] . T2-weighted fast spin-echo MR imagination without fat suppression and with fat suppression appears to supply one of the purest rating of fatty infiltration, without the confusing effects of T2* , fibrosis, and other factors that may restrict appraisal utilizing in-phase and out-of-phase MR imagination. T2W images are said to hold their maximum signal strength in fluid-filled parts, which is of import in contrasting tissues in clinical application.

It has been shown that many pathological conditions show up most readily under T2W images, and as such T2W images are used in concurrence with proton denseness ( PD ) or T1 weighted images as anatomical mention in many advanced MRI surveies. Again with fat bring forthing high signal strength on everyday SSFSE that may befog pathological causes of high signal that emanate from abdominal constructions that are surrounded by fat, including variety meats such as intestine, pancreas, and kidneys. Many of these diseases include but non limited to redness, infection, and unnatural fluid aggregations. Inversion-recovery ( IR ) techniques are said to hold favourable features in supplying more robust uniformity and are by and large less sensitive to susceptibility affects from beginnings such as intestine gas.

Three MR imaging techniques that permit the dislocation of the net MR signal into fats and H2O signal constituents are in clinical usage today for sensing and quantification fats by using the difference in precessional frequence between H2O and fats. A retrospective survey by Aliya Qayyum, et Al. suggested that liver fat may be more accurately quantified with fat-saturated FSE imagination than with out-of-phase gradient-echo MR imagination, particularly in patients with cirrhosis.


Basic Physics of MRI & A ; Spin Echo

The chief magnetic field of an MR scanner comes from a big electric current fluxing through wires that are formed into a cringle in the magnet of the imagination system. These wires are immersed in liquid He ( at superconducting temperatures ) so that really big currents can be used to bring forth the strong magnetic field and the liquid He degrees in the magnet is refilled at regular intervals. Power supply can be used to shoot electric current into the spirals of wire ( ramped ) , and this initial power supply will so be removed. The magnetic field of the imagination system can retain this electric current for many old ages with no extra electric current and with lone minimum loss in electric current and minimum lessening in magnetic field strength.

It is necessary to hold a beginning of H protons in order to bring forth MR signal and the signal from a tissue is determined in big portion by its H concentration.

Hydrogen Density:

This is the concentration of vibrating H atoms in a given molecular construction. The MR signal obtained from a tissue is determined in big portion by its H concentration. Hydrogen proton is positively charged and spins about its axis and as such Acts of the Apostless like a bantam magnet.

The H protons in human organic structure and similar biological tissues, therefore act like many bantam magnets. Hydrogen proton exists in different chemical signifier in the organic structure, chiefly in H2O and fat. When a patient is placed in an external magnetic field, or likewise if any biological apparition is placed in the MRI scanner, the H protons begin to aline in given waies dictated by the Torahs of quantum natural philosophies. It turns out that in the instance of the H karyon that two discrete energy degrees were created ; a higher energy degree with magnetic minutes opposing the external magnetic field, and a lower energy degree in which the karyon are aligned in the way of external magnetic field. Therefore a net magnetisation is produced following the application of an external magnetic field that will do a little bulk of spins to aline in the way of the applied field. The population difference between high and low energy degrees which is the step of sensitiveness, can be altered by increasing the field strength, hence the desire for a strong magnetic field, which for modern clinical scanners can be 1.5 or 3.

0 Tesla and many research scanners can run from 3.0 – 11.7T or even more.

In order to observe this signal which is a contemplation of energy difference, a 2nd magnetic field must be applied perpendicular to the external magnetic field ( z way normally referred as B0 ) at the same resonating frequence ( RF ) as resonance is said to assistance in an efficient transportation of energy.

Spin Echo:

It is import to observe that spins aligned with chief magnetic field do non lend any signal toward the resulting image. To bring forth any image, the coveted spins must be flipped into the cross plane. The basic sequence of spin reverberation consists of a 90-degree RF pulsation excitement, spacial encryption, a 180-degree refocusing pulsation, and signal read-out. Note that merely spins, precessing at a frequence equivalent to that of the 90-degree RF pulsation will be flipped into the cross plane. In a fast spin reverberation sequence, there are multiple stage encoding stairss, each applied for each individual reverberation during the long TR clip.

All informations collected are used in bring forthing an image and the effectual TE is used to stipulate the contrast. Effective Echo Time ( ETE ) is the comparative reverberation clip seen on the concluding image generated from the reverberation train sequence. The strength and continuance of the RF pulsation can be controlled to revolve the net magnetisation to any angle and if the RF pulsation rotates the net magnetisation 90A° into the transverse plane, it is termed a 90-degree RF pulsation. If the RF pulsation rotates the net magnetisation 180A° into the -z way, that is termed a 180-degree RF pulsation. Both 90-degree and 180-degree RF pulsations are of import when discoursing the techniques associated with both spin reverberation ( SE ) and gradient-recalled-echo ( GRE ) imagination. The net magnetisation that is aligned with the chief magnetic field is normally called longitudinal magnetisation ; application of 90A° RF pulsation will revolve this longitudinal magnetisation into the transverse plane, and this is called cross magnetisation ( B1 ) .

Using appropriate RF spirals to convey B1 signal, this acts to tip the spins out of alliance with external magnetic field ( B0 ) and towards the way of the spiral ( i.e. from longitudinal plane, towards the transverse plane ) . The spin reverberation can be used to retrieve all dephasing signal except for spin-spin interactions. After a 90A° RF pulsation, protons that were in stage in the transverse plane will get down to dephase. And after a certain sum of clip, if a 180A° RF pulsation is applied, the spins will revolve over to the opposite axis ; and instead than the spins go oning to dephase, the spins will get down to rephase. The spins will come back together to organize a maximal signal measured with the receiving system spiral ; after which spins Begin to dephase once more until another application of 180A° RF pulsation.

The procedure can go on until no signal can be recovered.A signal extremum is formed at the echo clip ( TE ) , when the transverse magnetisation is wholly in stage and the measured MR-signal is at its upper limit. When the transverse magnetisation begins to dephase, the measured MR-signal Begins to diminish until the magnetisation is wholly dephased or out of stage, at which clip the mensural signal is zero. The primary factors that provide image contrast in a typical spin-echo sequence are proton denseness, longitudinal relaxation ( T1 ) , and cross relaxation ( T2 ) . Although proton denseness which constitutes brightness transition is ever present in all the images, farther contrast can be manipulated by altering the timing parametric quantities utilized in the sequence. Through alteration of repeat clip ( TR ) , echo clip ( TE ) and assorted gradient minutes, image contrast can be altered to stress a peculiar relaxation clip or the proton denseness. At long TR and minimal TE values, tissue contrast is entirely from proton denseness as the difference in strength that arises from relaxation times vanishes.

Similarly images formed from short TR and long TE have really low signal/noise ratio ratio ( SNR ) and minimal contrast and are by and large non recommended. Tissues with high T1 values besides tend to exhibit high T2 values and as such elevated proton densenesss. T1 relaxation is the rate at which longitudinal magnetisation grows back and is different for protons associated with different tissues ; this is the cardinal beginning of contrast in T1-weighted images. T1 is a parametric quantity that is characteristic of specific tissue and varies with the strength of the chief magnetic field. Remember that the net magnetisation is made up of parts from many protons, which are all precessing. During and Immediately after RF pulse, the protons are precessing together ( “ in stage ” ) .

But shortly after, get down to dephase due to several effects. In the instance, when dephasing is strictly due to the consequence of spin-spin interactions, the dephasing is called T2 decay or T2 relaxation. T2 is besides a parametric quantity that is characteristic of specific tissue and characterizes the rate of dephasing for the protons associated with that tissue.

Relaxation Timess

T1 and T2 relaxation times are base on the thermic gesture or random hit of atomic atoms within molecules of life tissues.

These random gestures cause fluctuations in energy degrees within the H karyon when placed in an external magnetic field. One of the advantages of MRI is its first-class soft-tissue contrast which can be manipulated in an infinite ways ; by progressively changing the echo clip ( TE ) and keeping steady the repeat clip ( TR ) , the signal contrast can be altered or T2-weighted. If a long TE is used, the built-in differences in T2 times of tissues will go evident ; signal from tissues with long T2 ( e.g. H2O ) will take longer to disintegrate and their signal will be greater ( appear brighter in an image ) than the signal from tissues with short T2 ( e.g.

fat ) . T2 is once more defined as the clip that it takes for the cross magnetisation to disintegrate to 37 % of its original value ; and different tissues have different T2 values and they are said to dephase at different rates. If it is possible to make an image at a clip when the transverse magnetisation curves were widely separated, so there would be high contrast between the tissues in the image. In a similar mode TR governs T1-contrast such that, tissues with long TR ( e.g. H2O ) will take longer clip to retrieve back to their equilibrium magnetisation values, and such that a short TR interval will do the tissue with long T1 appear dark compared to another tissue with short T1 ( e.

g. fat ) . It is of import to observe that both T1 and T2 relaxation processes occur at the same time and it takes merely a few seconds for most of the cross magnetisation to dephase and for most of the longitudinal magnetisation to turn back to its original strength and analogue to the chief magnetic field.

Signal strength difference originating from relaxation clip differences at long TR and short TE, and tissue contrast would be due to proton denseness difference between the tissues. Images formed from short TR and Long TE tends to hold really low signal/noise ratio ratio ( SNR ) and negligible contrast and should be of no clinical value.

Fat Suppression

Historically, clinical MR imagination is based on the designation of signals that are produced from H, which are contained in H2O and fat constituents of human tissues. An of import technique in MRI is taking the high signal fat constituent from the image ( fat suppression ) . There are many ways this can be achieved but each method relies on either the resonating frequence ( chemical displacement ) or relaxation clip differences between H2O and fat. In the chemical selective impregnation method a preparatory pulse sequence is acquired which uses narrow bandwidth RF pulsation to excite the fat extremum entirely. The aroused fat is so intentionally dephased go forthing merely the H2O available for subsequent sensing. Another common method is the Short TI Inversion Recovery ( STIR ) .

An inversion-recovery pulsation sequence is utile for stamp downing unwanted signals in MR images, while contrast weighting is being controlled through choice of TR and TE. Spectral presaturation with Inversion Recovery ( SPIR ) , is a combination of the two old methods, merely the fat is excited and so inverted as in the STIR method. This method is different version of the one first developed by Dixon which involves geting images with fat and H2O in stage and out of stage and executing an image minus. Ideally two sets of spin-echo images are obtained ; one with the usage of the presaturation pulsation ( fat-saturated images ) and another without its usage ( non-fat-saturated images ) . These two sets of images would be obtained with indistinguishable imaging parametric quantities except for application of the presaturation pulsation, so that the two images are straight comparable. On a pixel-by-pixel footing, the non-fat-saturated image will incorporate the signal strength of the H2O plus fat protons, whereas the fat-saturated image will incorporate merely the signal strength of the H2O protons.

If fat-saturated and non-fat-saturated images are acquired with otherwise indistinguishable imagination parametric quantities, the signal strength differences between the two images can be entirely attributed to the presence of fat. SPIR technique uses a 180 grade pulsation to selectively invert and null fat signal from the imagination volume. SPIR is much less susceptible to homogeneousness of the chief magnetic field as it depends on the T1 recovery times instead than the precessional frequence, and relaxation times are non affected by little alterations in homogeneousness. SPIR technique is of import in distinguishing pathology ( H2O based ) and normal tissue ( fat based ) . Water or fat impregnation is most efficaciously achieved on high field systems, therefore the demand for 3T MRI system.

Abdominal Imaging at 3T

Magnetic resonance ( MR ) imaging at 3T has offered an improved signal/noise ratio ratio ( SNR ) compared with that at 1.5 T. However the usage of 3T MR imaging for abdominal ratings, has lagged behind because of the trouble of imaging a big volume during respiratory gestures. The natural philosophies of high field strength besides convey some disadvantages, such as additions in the specific soaking up rate, in magnetic field inhomogeneity effects, and in susceptibleness artefacts, every bit good as the demand for radiofrequency ( RF ) alterations. Images acquired with 1.5T MR systems were of good diagnostic quality, but the desire to cut down the scan clip by increasing the velocity and improved image quality required the migration to higher field strength. The improved SNR can non be viewed in isolation from other imaging parametric quantities ; theoretically SNR can besides be improved by increasing the imagination clip or by increasing the figure of signals averaged. T1 and T2 are intrinsic belongingss but they change well with field strength, and there are significant differences between T1- and T2-weighted pulse-sequences used for 3T and 1.

5T. A misregistration artefact normally occurs where the signals from fat and H2O are superposed ; the displacement is said to be relative to the magnetic field strength [ 32 ] . Increase chemical displacement artifacts at 3T, may hold inauspicious effects for diagnostic quality of the images. Even though, the tendency toward higher field strengths has been driven by the desire to increase the velocity for imaging and improved image quality ( SNR ) ; there are factors that tend to antagonize these benefits. Two of most the of import effects are the additions in tissue T1 values and in the radiofrequency energy ( SAR ) needed to magnetically excite the protons in tissue. The increased T1 values may necessitate an addition in repeat clip ( TR ) and an addition in imaging clip as a consequence of lessening in signal strength and tissue contrast. T2-weighted fast SE sequences uses multiple 180A° refocusing pulsations and as such SAR intensifier ; two sequences, hyperechoes and passage pseudo steady provinces ( TRAPS ) may be used to change the refocusing pulses in a mode that reduces SAR without decreasing SNR. The T2-weighted sequences most normally used in abdominal imagination are the fast SE sequence and its discrepancies, the Half-Fourier rapid acquisition with relaxation sweetening ( RARE ) sequence.

Parallel imagination may use shorter reverberation train to cut down SAR effects and to cut down image blurring that are characteristic of T2W fast SE imaging [ 33 ] . Many benefits of 3T imagination are lost in many abdominal imagination instances due to standing moving ridge artefacts which may badly degrade the quality of T2-weighted images obtained at 3.0 T in patients who are corpulent or have ascites. At 3T MR imagination, the energy ( SAR ) deposited by radiofrequency moving ridges may be clinically important, estimated to be fourfold compared to that at 1.5T. Standing wave effects are even more marked in pregnant adult females because of their big girth and the presence of amnionic fluid. Fetal MR imaging at 3.

0 T are non recommended because of increased concern for foetal safety at high field strengths.

Using echo spacing to optimise TE values in a Multi-spin reverberation Fat Study

Echo spacing ( ES ) determines the separation in msecs of the reverberations in the reverberation train length ( ETL ) . Echo train length ( ETL ) is the entire figure of reverberations collected during one TR in a fast scan imagination sequence.

Its part to imaging contrast is based on the figure of reverberations used to bring forth an image and the clip when the reverberations are collected during the sequence. Optimization of protocols at 3.0 Thymine for both clinical and in vivo applications requires an grasp of the alterations in T1 and T2 relaxation times, which accompany any alteration in field strength. These relaxation times can impact both the spacial declaration and the signal-to-noise ratio ; but more significantly can assist find the nature of contrast in MR images.

These relaxation times can besides find the choice of clocking parametric quantities for the imagination pulse sequence, which may impact the entire imagination times and image quality. T1 and T2 are known to alter with magnetic field strength and magnetisation transportation, which depends on H2O mobility and other tissue belongingss, such that it can non be predicted accurately with a simple theoretical computation. Therefore, accurate finding of proton relaxation times in a high-field MR imagination is indispensable in researching the capablenesss of high-field MR imagination system. A big figure of techniques for mensurating T1 and T2 relaxation times in tissues have been reported [ 31 ] . These methods, nevertheless, frequently require really long imaging times, which makes them susceptible to imaging artefacts caused by patient gestures. Therefore, relaxation parametric quantities in the human venters have been seldom studied in inside informations. The intent of this survey is in-part to mensurate the consequence of echo spacing on T2 relaxation times of known fractions of olive oil and H2O mixture apparition as portion of other attempt to develop a safety MR biomarker that could be translated to human abdominal disease surveies.

Many MRI surveies have investigated the usage of magnetic resonance relaxation times for tissue word picture. A figure have been performed in vivo with clinical abdominal imagers. A batch of information has been collected ; but the huge consequences so far have non established any function of quantitative tissue relaxation clip measurings in the clinical abdominal disease diagnosing.

And none to the best of our cognition has stipulated the effects of echo spacing in relaxation clip measurings. Generating T2-contrast images require aggregation of images utilizing pulse sequences with long TR and intercede echo clip ( TE ) . The sum of signal loss depends on the clip between excitements ( TR ) and acquisitions or echo times. In order to obtain sole T2- weighted images, TR must be really long, such that longitudinal recovery is about complete and T1-contrast is minimized. Pure T2-weighted images can merely be generated utilizing spin-echo based pulsation sequences which allow true spin-spin relaxation and are independent of the field inhomogeneity.

Methods and Materials

Purpose:To analyze the consequence of echo infinite on T2 relaxation times obtained in phantom experiments of assorted fractions of olive oil and H2O, utilizing both standard and Spectral Saturation Inverse Recovery fat suppression techniques of Carr-Purcell-Meiboom-Gill ( CPMG ) imaging sequences.

MR Scanner and Phantom

The MR scanner is a 3.0-Tesla superconductive magnet ( Achieva by Philips medical system, Netherlands ) . The apparition is made of nine cylindrical phials consist of 1 agarose gel, 1-pure-water, 1 pure olive oil, 6 assorted fractions of olive oil and H2O ( 10, 20, 30, 40, 50, & A ; 60 % of olive oil ) .

Other fixed parametric quantities include – Receiving Coil: sense-Knee-8, Transmitting Coil B: organic structure, Repetition Time: 5000, Echo Train Length: 32, Flip Angle: 90, Acquisition Number: 8, Space between Slices: 5, Pixel Bandwidth: 1296, Matrix size: 256×256, Slice Thickness: 5, MR Acquisition Type: 2D, Software Versions ( s ) : 2.6.3 & A ;

Data AcquisitionAll 9 phials were taped together and scanned utilizing Carr-Purcell-Meiboom-Gill ( CPMG ) sequence with and without Spectral Saturation Inverse Recovery ( SPIR ) . Imaginations of the water-oil cylindrical phials were repeated with the apparition in a horizontal place. The MR imagination surveies were performed with a 3.0T MR imagination system ( Achieva ; Philips ) operating with Release 2.6 package. The same grading factors were applied to each image in the multi-echo acquisition.

In order to look into the influence of echo infinite on the T2 curves, the apparition experiments were independently carried out with a matrix of 256 ten 256, TR of 5000msec. , echo train length of 32, echo infinites of 10, 20, 30 and 40 msec severally utilizing standard CPMG and SPIR for fat and H2O. All scanning was performed under the supervising of a engineer ( H.J. , with over 15 old ages experience in MR imaging ) .

Image Processing and AnalysisThe natural image informations were exported from the imaging unit for off-line Reconstruction and were converted to a format suited for analysis by utilizing package ( MATHCAD, version 2000i, Parametric Technology Corporation ( PTC Inc ) Needham, MA ) . The finding of T2 is carried out with signal strength values obtained utilizing both standard CPMG and SPIR fat suppression sequences that utilizes the slice selective 180-degree pulsations with full stage rewinding in between the refocusing pulsations. The proton denseness and evident T2 maps were estimated utilizing pel by pel suiting curve of the signal strengths obtained with 32 echo times ( TE ) to a bi-exponential decay theoretical account. The progressively T2-weighted images can be created by uniting the 32 reverberations of each piece into back-to-back groups of four and ciphering the geometric mean of each group. Algorithms provided by my advisor, the primary research worker for this undertaking [ H.

J. ] and implemented in MATHCAD package. The molecules incorporating fat and H2O will dwell of hovering signal strength as a map of echo clip. Simplified signal strength expressions obtain from two constituents of H2O and fat by patterning water-olive oil mixture can be summarized as below:

SI = Signal Intensity, A = free protons, B = edge protons, W = H2O,

f = fat, N ( H ) = Proton Spin Density, TEi=Echo Time ( one =1, 2.

.. 32 ) ,

Magnetization Transfer ( MT ) : Selective presaturation RF can excite the tightly bound protons ; the edge spins may reassign some of their magnetisation to the free spins and therefore cut downing signal part from the edge pool. The decrease in signal will be relative to the sum of magnetisation transportation to the free spins in assorted molecular classs.

Statistical Analysis

Statistical analysis was performed by utilizing package ( Microsoft Excel, version 2007 ) .

In mated two sample t-Test, Pearson correlativity coefficient were used to analyze the association between T2 values obtained from two similar state of affairss that differ merely in one status. Differences with p-values less than 0.05 were considered statistically important.


In this survey for all given reverberation infinites, T2 values showed strong correlativity with TE values even though that some correlativity were non every bit strong as others but the scope is by and large really good ( 0.99-0.

88, p-values & lt ; 0.05 ) for the standard CPMG sequences. T2 values obtained utilizing SPIR fat suppression showed assorted consequence with strong correlativities ( important p-values ) with TE values at lower oil fractions, and differing merely in some T2 values that were obtained with SPIR fat suppression at mid to high degrees of oil fraction where the p-values that exceed the threshold 0.05 value. Both in SPIR fat suppression and standard CPMG, T2 correlativity with TE diminished but remains comparatively high as echo infinite ( ES ) is increased.

T2 values are by and large higher when there is smaller fraction of olive oil compared to H2O ; the T2 values lessenings as oil fraction additions but so stabilizes as the oil fraction increased, and nevertheless T2 can non be said to correlate with the per centum of oil fraction. Statistically, echo infinites have some discernible consequence on the T2 values which disappeared with increasing TE and T2-weighting.In our survey, shorter echo infinite produce compact sequence timing and had better declaration with decreased artefact ; and in most clinical environment, information from T2-weighted images are position and analyzed in footings of qualitative nature by comparing discernible differences in one or two images ( see figure2 ) . In this survey, we were able to retrace T2 maps and step the T2 values in each phial for both standard CPMG and SPIR fat suppression with similar parametric quantities.

The consequence showed big additions in standard divergences at increased reverberation infinites, which is an indicant that there are big fluctuations of T2 values obtained when utilizing increased echo spacing at 3.0T. There are lower standard divergences at shorter reverberation infinites, therefore less fluctuation of T2 values. There are important different between standard divergences from standard CPMG and standard divergences from SPIR FS, the divergences from standard CPMG are larger than those from SPIR FS ( see figure7 A and B ) .In a mated two sampled t-Test for T2 values obtained utilizing ES of 13msec for both SPIR FS and standard CPMG, and utilizing ES 10 millisecond ( ETE are 65 and 50 millisecond. Respectively ) for both SPIR FS and standard CPMG, their Pearson correlativities at these given reverberation infinites are ( 0.97 and 0.

84 severally, with p-value & lt ; 0.05 ) . This is to state that SPIR FS correlative good with Standard CPMG.Zero signal strengths were recorded for pure olive oil in all the echo infinites utilizing SPIR FS, which is good indicant of the fat suppression. An effectual fat suppression that can be translated into in vivo hepatic surveies could supply a mechanism for quantifying T2 relaxation measurings. See figure1Some of the effects seen on T2 can be attributable to magnetization transportation and others to the oil fraction consequence.

A two factor without reproduction ANOVA has p-values & lt ; 0.05, which is to state the length of the reverberation infinites has no experimental important consequence on both the criterion CPMG and SPIR FS T2 values. See Table1 and Table2In a separate mated sample t-Test for mean T2 values utilizing 3 short reverberation infinites ( 8.5, 10, & A ; 13msec ) for SPIR FS, their correlativity scope were 0.98 – 0.89 with p-values greater than 0.05. While a similar mated sample t-Test for T2 values for intermediate ES ( 20, 30, & A ; 40msec ) , their Pearson correlativity scope were 0.

95 – 0.73 with p-values & lt ; 0.05 ) . There are discernible stabilisation on the values of T2 as the echo infinite is increased which is an indicant of increased T2-weighting and assume less T1-w consequence. But there is clearly some unexplained effects due to oil fraction and possibly magnetisation transportation ; T2 values were higher for smaller fractions of olive oil and stabilizes as oil fraction increased. Thus a important betterment can be achieved with increased ETL ( shorter ES ) in the T2 appraisal. There are besides increased discernible noises as signal strength diminishes with increasing T2-weighting ( see figure3 ) .

There is grounds of signal loss both in short reverberation infinite, every bit good as intermediate reverberation infinites for H2O suppression sequences. Fat has short T1 and T2 relaxation times and may see signal strength loss during H2O suppression due to H2O long relaxation times. In this survey we are chiefly interested in fat suppression instead than H2O suppression that can be translated to human surveies of chronic liver diseases.

In both fat suppression and H2O suppression, the fat signal diminishes as the TE is lengthened.


This survey allows the coincident image acquisition of water-oil mixture as good their T2 maps. This survey support T2 values stabilisation and as such support the usage of FSE imaging as one manner to get the better of T2* sharp-drop effects and enables comparative appraisal of oil and H2O signal constituents. It besides back up T2 measurings as a potency for supplying information on the comparative degree of fat content in a water-oil mixture which could enable dependable appraisal of hepatic tissue as a whole in a clinical survey. But no clinical correlativity to NALD and hepatic steatosis could be drawn from this survey entirely.

This survey back up the usage of shorter echo spacing to optimise multi-echo sequence, an optimized FSE is a manner to accurately try and gauge T2 values. Study support loss of signal strength at long TE particularly for short T1 and T2 molecules such as fat ; long ETE could take to possible loss of signal strength in lipid base molecules. Study support that T2 values from standard CPMG correlative with T2 values from SPIR FS and as such support the usage of SPIR FS in a FSE for appraisal of oil-water content. This survey suggest in both instances of SPIR FS and standard CPMG that T2 values are non alone and as such represent some degree of trouble for efficient and accurate measuring of T2 values. And in both SPIR FS and standard CPMG, shorter ES can assist minimise standard divergences in T2 measurings. Sequence optimisation can intend different things to different people, from minimising the scan clip in order to increase throughput to maximising the sum of information produced in order to increase pathological diagnosing.

Research engineer and Radiologist must so strike balance between many viing aims in order to make the coveted consequence. The expected addition in SNR from migration to 3.0T magnetic field strength and from combination of multi-echo sequence can be traded off to farther cut down scan clip with assorted acceleration techniques and cut down SAR that can be generated from high impact RF-pulses.

Given a fixed ETL, one will about desire to utilize as short an ES as possible in order to increase figure of pieces, better the contrast control of the images and cut down image blurring. ES is straight related to the coveted ETE, along with coveted bandwidth. ES is a parametric quantity that is fixed within a sequence ; ETE on the other manus can be programmed through k-space reordering to accomplish the coveted consequence.

K-space reordering is an decision maker controlled map within most system ‘s package and this can be reordered during each information acquisition. The k-space reordering is limited merely by the system ‘s hardware and package capablenesss in puting informations anyplace within the k-space and utilizing such informations to retrace an appropriate image. ES is hence an of import parametric quantity that could be employed to optimise TE during T2-contrast imagination. And given the importance of TE for quantification of T2 values, ES can be said to be an of import factor in accurate standardization of T2 values, should quantification of T2 be deemed necessary for accurate appraisal of the comparative degrees of fat fractions during many and peculiarly early phases of nonalcoholic liver diseases.


Our survey is limited by how closely the usage knee-coil receiving system to pattern abdominal receiving system spiral. The cylindrical phials apparition was closely held together and placed in a cylindrical knee-coil receiving system ; abdominal receiving system spirals are surface based and may non fit precisely with knee-coil.

MRI is inherently 3-dimensional and no relationship between imaging plane and the setup ; nevertheless abdominal spiral was non available for this survey. Oil and H2O have been used in many research surveies to pattern lipid-water survey, we used olive oil which is known to hold many generic versions and the quality is non ever assured in many instances. Fat is known to hold complicated chemical spectrum that contains a figure of different spectral constituents, CH3, CH2, CH2COOR, and CH=CH groups which jointly represent the entire fat signal [ 86 ] . Even with a narrow set SPIR FS can non wholly saturate signal from fat without impacting signal from H2O. Any phase interaction between different fat constituents can add considerable complexness to the ascertained signal fluctuation at a given TE. SPIR FS normally takes more clip than gradient-echo based sequences ; it requires high RF power therefore increased SAR degrees.


Given a long TR, shorter echo spacing is a method that can be used to optimise echo clip and adequately sample T2 values. Short echo infinite can assist shrivel big standard divergences and big fluctuations in T2 measurings. Spectral presaturation opposite recovery fat suppression ( SPIR FS ) T2 measuring correlative with Carr-Purcell-Meiboom-Gill ( CPMG ) T2 measurings and as SPIR FS can be used to gauge comparative degrees of lipid fractions in a water-fat survey.


Figures and Tables

Figures 1

Figures 2

Figures 3

Figures 4